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What is GIANI?
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Giani is a FIJI plugin for the routine analysis of 3D cell biology image data. Implemented specifically with batch-processing in mind, GIANI is designed to:

* Read data sets in any format recognised by BioFormats
* Identify centres of nuclei using blob detection
* Segment nuclei fully, using either mcib3d or MorphoLibJ
* Segment cells
* Measure nuclear and cell morphology, together with fluorescence intensities within these regions.
* Explore results using a results browser based on the 3D RoiManager

Click `here <https://doi.org/10.1101/2020.10.15.340810>`_ to read the paper introducing GIANI.